Characterization of a 17kDa FKBP-type peptidyl-prolyl cis/trans isomerase from Vibrio anguillarum
- Abstract
- Peptidyl-prolyl cis/trans isomerase (PPIase) catalyzes the isomerization of peptide bonds for conformational changes in native folded protein. FKBP-type of PPIase was isolated from Vibrio anguillarum O1 and named as VaFKBP17. To investigate its biochemical properties, the ppi gene from V. anguillarum O1 was isolated and overexpressed in Escherichia coli. VaFKBP17, with about 17kDa molecular size, was performed protease-coupled assay for isomerization activity. Result indicated that activity of VaFKBP17 was the highest at low temperature (5°C) and alkaline conditions (pH 10) using Succinyl-Ala-Phe-Pro-Phe-pnitroanilide as substrate. With immunosuppressant FK506, isomerization activity of VaFKBP17 was inhibited. Through citrate synthase thermal aggregation activity, chaperon activity of VaFKBP17 was also checked. Based on its ability to catalyze refolding, effect on inclusion body was investigated during dilution process. As a result, VaFKBP17 showed the ability to assist protein refolding. The results provide evidence that VaFKBP17 possesses chaperone-like activity. We analyzed the structural homology modeling of VaFKBP17 comparison of bacterial FKBPs.
- Author(s)
- 조건아
- Issued Date
- 2015
- Awarded Date
- 2015. 2
- Type
- Dissertation
- Publisher
- 부경대학교 대학원 생물공학과
- URI
- https://repository.pknu.ac.kr:8443/handle/2021.oak/11811
http://pknu.dcollection.net/jsp/common/DcLoOrgPer.jsp?sItemId=000001967430
- Affiliation
- 부경대학교 대학원 생물공학과
- Department
- 대학원 생물공학과
- Advisor
- 공인수
- Table Of Contents
- ABSTRACT
1.INTRODUCTION 1
2.MATERIAL AND METHOD 3
2.1 Bacterial strains, plasmids and growth conditions
2.2 Cloning, overexpression and purification of recombinant VaFKBP17
2.3 Protease coupled assay•
2.4 Inhibition assay with immunosuppressant FK506
2.5 Citrate synthase thermal aggregation assay
2.6 Effect of refolding on inclusion body
2.7 Molecular modeling and docking
3. RESULTS 6
3.1 Sequence analysis and overexpression of recombinant VaFKBP17
3.2 PPIase activity of VaFKBP17 and inhibition by FK506
3.3 Chaperone activity for preventing thermal aggregation
3.4 Effect of refolding on inclusion body
3.5 Homology modeling of VaFKBP17 and comparision of bacterialFKBPs
4. DISCUSSION 9
REFERENCE 20
KOREAN ABSTRACT 22
- Degree
- Master
-
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