PUKYONG

Cloning of phosphomannomutase/phosphoglucomutase (pmm/pgm) gene of Vibrio anguillarum related to synthesis of LPS and construction of knock out mutant

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Alternative Title
Vibrio anguillarum로부터 LPS 생합성에 관여하는 phosphomannomutase/phosphoglucomutase (pmm/pgm) gene 의 클로닝과 돌연변이 균주 제작
Abstract
We sequenced 1341bp ORF of phosphomannomutase/phosphoglucomutase (pmm/pgm) gene from Vibrio anguillarum, the causative agent of fish vibriosis catalyzes the interconversion of mannose 1- phosphate and mannose 6- phosphate, and glucose 1- phosphate and glucose 6- phosphate. We found that pmm/pgm gene was up regulated under cold stress by Reverse Trancriptase-Polymerase Chain Reaction (RT-PCR). We constructed knock out mutant by homologous recombination to identify relation between PMM/PGM protein and synthesis of lipopolysaccharide (LPS). LPS from V. anguillarum wild type and mutant was isolated. We checked high molecular weight (HMW) of LPS was immigrated and several bands smeared by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and silver staining. Growth and viability of mutant was lower than V. anguillarum wild type on stationary phase. In this study, we identified pmm/pgm gene has a important role for biosynthesis of LPS.
Author(s)
오륜경
Issued Date
2012
Awarded Date
2012. 8
Type
Dissertation
Publisher
부경대학교
URI
https://repository.pknu.ac.kr:8443/handle/2021.oak/25056
http://pknu.dcollection.net/jsp/common/DcLoOrgPer.jsp?sItemId=000001964941
Alternative Author(s)
Ryunkyoung Oh
Affiliation
부경대학교 대학원
Department
대학원 생물공학과
Advisor
공인수
Table Of Contents
I. INTRODUCTION 1
II. MATERIALS AND METHODS
2-1. Bacterial strains, plasmid, and culture condition 4
2-2. Sequencing 5
2-3. RNA isolation and cDNA synthesis 6
2-4. RT-PCR 6
2-5. Overexpression and purification of recombinant protein 6
2-6. PMM and PGM assay 8
2-7. Construction of pmm/pgm knockout mutant 9
2-8. PCR for knock out mutant 10
2-9. Isolation of crude LPS and SDS-PAGE 11
III. RESULTS AND DISCUSSION
3-1. Sequencing and analysis of amino acid sequences 12
3-2. Cloning of pmm/pgm from V. anguillarum 15
3-3. Transcriptional analysis of pmm/pgm gene 17
3-4. PMM and PGM activity 19
3-5. Knock out mutation 20
3-6. Comparison of LPS profile 24
3-7. Growth and viability 24
IV. REFERENCES 28
V. KOREAN ABSTRACT 31
ACKNOWLEDGEMENT 32
Degree
Master
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대학원 > 생물공학과
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