Development of a mass screening system for antiviral drug discovery using viral hemorrhagic septicemia virus as an RNA virus surrogate
- Abstract
- Viruses are intracellular pathogens that cannot reproduce on their own outside of their host. Viruses frequently mutate due to their rapid replication rate. These genetically modified viruses often acquire cross-species infectivity, making existing vaccines useless. Therefore, there is a need for a broad range of antiviral drugs that act on various viral infections. In this study, a recombinant viral hemorrhagic septicemia virus (rVHSV) expressing an enhanced green fluorescence protein (eGFP), with no risk to human infection, was used as an RNA surrogate virus. We developed a fluorescence and CPE-based high-throughput screening (HTS) system capable of screening large-scale libraries for the development of a wide range of antiviral drugs for common RNA viruses. Total substance libraries of 15,635 chemical compounds and 3,498 extracts of plants and marine organisms were screened using this system and 27 substances showed antiviral activity against rVHSV. Among them, two chemicals and two extracts were selected as the final candidates based on their antiviral activity at low concentrations. Because the antiviral activity of these substances has not been reported, they could be potential antiviral agents for the treatment of RNA virus infections.
- Author(s)
- 신지우
- Issued Date
- 2023
- Awarded Date
- 2023-02
- Type
- Dissertation
- Publisher
- 부경대학교
- URI
- https://repository.pknu.ac.kr:8443/handle/2021.oak/32916
http://pknu.dcollection.net/common/orgView/200000669045
- Affiliation
- 부경대학교 대학원
- Department
- 대학원 해양수산생명과학부 미생물학전공
- Advisor
- 최태진
- Table Of Contents
- Introduction 1
Materials and methods 4
2.1. Cell 4
2.2. Virus and plaque assay 5
2.3. Exploration of the eGFP fluorescence wavelength of rVHSV 6
2.4. MOI and culture conditions for optimal screening 8
2.5. Optimization of floating condition for dispensing process 9
2.6-1. Substances for screening 10
2.6-2. Screening procedures 11
2.7. Second-round screening of selected substances 13
2.8. CC50 and MNCC for cytotoxicity of selected candidates 14
2.9. Determination of IC50 of final candidates against VHSV 16
2.10. Preparation of extract from different part of Atrina pectinata 17
2.11. Antiviral activity test of extracts from different parts of A. pectinata against VHSV 19
Results 20
3.1. Optimization of rVHSV eGFP fluorescence wavelength 20
3.2. Optimization of MOI, culture condition for screening 22
3.3. Determination of optimal speed for mixing 24
3.4. Screening of antiviral substances 25
3.5. Second-round screening with effective concentration 27
3.6. Cytotoxicity of selected candidates 31
3.7. Antiviral activity of final candidates 34
3.8. Anti-viral activity of extracts from different parts of A. pectinata. 37
Discussion 39
국문 초록 43
Acknowledgement 44
Reference 45
- Degree
- Master
-
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