박테리아 공동발현 및 즉각적 이황화 결합에 의한 단백질 자가조립체의 안정성 증가
- Alternative Title
- Improved Binding Stability of Self-assembled Proteins that Form in situ Disulfide Bonds through Bacterial Co-expression
- Abstract
- Research on the utilization and application of biomolecular tools is being actively conducted. Currently, there is a demand for excellent molecular tools that require greater biocompatibility and stability than existing molecular tools. The self-assembled coiled coil, which can be one of the candidates, is one of the motifs that are very abundant in nature and has the characteristic that complementary coils are specifically assembled with each other. However, self-assembled coiled coils can sometimes become unstable in harsh biological environments, and rapid dissociation by dilution becomes a fatal problem. Formation of disulfide bonds by cysteine is often used as a strategy to increase structural stability by artificially inserting into proteins. However, due to the non-specific binding of thiol groups, a complicated post-processing process is required compared to conventional protein purification. Here we report a cysteine-coupled self-coupling coiled coil that introduces cysteine to form a disulfide bond to overcome the rapid dissociation of self-assembled coiled coil and is co-expressed in bacteria to overcome the defect of non-specific coupling between cysteines. This scaffold, co-expressed in E.coli SHuffle, formed heterodimers by self-assembly and then coupled with disulfide bonds, showed improved bonding stability in vitro compared to wild-type coiled coils. These results suggest that engineered self-assembled coiled coil-based scaffolds can be promising tools in various biotechnology fields in the future.
- Author(s)
- 양이지
- Issued Date
- 2023
- Awarded Date
- 2023-02
- Type
- Dissertation
- Keyword
- self-assembly, cysteine coupling, protein scaffold, co-expression
- Publisher
- 부경대학교
- URI
- https://repository.pknu.ac.kr:8443/handle/2021.oak/33070
http://pknu.dcollection.net/common/orgView/200000668842
- Alternative Author(s)
- Iji Yang
- Affiliation
- 부경대학교 대학원
- Department
- 대학원 화학융합공학부
- Advisor
- 임성인
- Table Of Contents
- Ⅰ. 서론 1
Ⅱ. 이론 10
1. 자가 결합 코일 (Self-assembling coiled coil) 10
2. 단백질 내 이황화 결합을 위한 시스테인 도입 16
3. 박테리아 내 단백질 공동발현 시스템 구축 19
4. 실험법 24
4.1 SDS-PAGE & Native PAGE 24
4.2 Isothermal Titration Calorimetry (ITC) 25
4.3 Fluorescence Resonance Energy Transfer (FRET) 27
Ⅲ. 실험 29
1. 실험 재료 29
2. 실험 방법 30
2.1 Plasmid Construction and Bacterial Strains 30
2.2 Protein Expression and Purification 31
2.3 SDS-PAGE and Native PAGE 32
2.4 ITC Assay 33
2.5 Size Exclusion Chromatography (HPLC) 33
2.6 FRET Assay 33
Ⅳ. 결과 및 고찰 35
1. 야생형 코일-형광단백질 구조 설계 35
2. 야생형 코일-형광단백질 발현 및 정제 38
3. 야생형 코일-형광단백질의 자가결합 능력 평가 42
4. 코일의 시스테인 돌연변이 부위 지정 및 시스테인 커플링 코일-형광단백질의 공동발현 및 정제 46
5. 시스테인 돌연변이-형광단백질 복합체 후보 선정 57
6. 시스테인 돌연변이에 따른 결합안정성 향상 평가 52
Ⅴ. 결론 61
Ⅵ. 참고문헌 63
- Degree
- Master
-
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