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Purification and Characterization of Cathepsin B Inhibitors from a marine Pseudomonas sp. strain PB01

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Alternative Title
마린 Pseudomonas sp. PB01 로부터 Cathepsin B 저해제의 정제 및 특성
Abstract
A novel cathepsin B inhibitor-producing microorganism was identified based on its 16S rRNA sequence as Pseudomonas sp. strain PB01 (accession no. EU126129). Before isolating inhibitors, enzyme inhibitors production was investigated under various culture conditions, including temperature, initial medium pH, and shaking speed. Additionally kinetic study revealed that the inhibitor production paralleled with cell growth. From the culture broth, two cathepsin B inhibitors were isolated, which structural characterizations were elucidated as phthalates. Both of them inhibited cathepsin B dose dependently with IC50 of 0.42 and 0.38 mM, respectively. Kinetic analyses showed that dibutyl phthalate and di-(2-ethylhexyl) phthalate acted in noncompetitive manners, which were agreeable with their characteristics. Furthermore, both of them not only caused inactivation of the pericellular but also intracellular cathepsin B of murine melanoma cell with no acute cytotoxicity.
Author(s)
Hoang Le Thu Van
Issued Date
2008
Awarded Date
2008. 2
Type
Dissertation
Keyword
Cathepsin B inhibitor Pseudomonas sp PB01 phthalate
Publisher
부경대학교 대학원
URI
https://repository.pknu.ac.kr:8443/handle/2021.oak/4021
http://pknu.dcollection.net/jsp/common/DcLoOrgPer.jsp?sItemId=000001984164
Affiliation
부경대학교 대학원
Department
대학원 화학과
Advisor
Kim, Se-Kwon
Table Of Contents
Abstract = i
Table of contents = ii
List of tables = v
List of figures = vi
List of abbreviations = ix
Introduction = 1
Experimental procedures = 11
1. Materials = 11
2. Methods = 11
2.1. Microorganism culture conditions = 11
2.2. Cathepsin B inhibitory assay = 12
2.3. Isolation of a marine-derived microorganism genomic DNA = 13
2.4. PCR amplification of the 16S rRNA gene = 13
2.5. DNA sequencing and data analysis = 14
2.6. Extraction and purification of inhibitors = 15
2.7. Spectroscopic measurements = 15
2.8. Determination of the inhibition pattern = 15
2.9. Cytotoxic assessment using MTT assay = 16
2.10. Fluorescent microplate assay = 16
2.11. Analysis of the effects of two isolated phthalates on intracellular cathepsin B on tumor cell = 17
2.12. Statistical analysis = 17
Results and Discussions = 17
1. Screening of marine microorganism culture broths for cathepsin B inhibitor = 17
2. Identification of a marine microorganism = 18
3. Effects of culture condition on cathepsin B inhibitor production = 21
3.1. Effects of initial medium pH, temperature, and shaking speed on cathepsin B inhibitor production = 21
3.2. Growth of strain PB01 and kinetics of inhibitor production according to cultivation time = 26
4. Isolation and purification of active compounds from Pseudomonas sp. PB 01 culture broth = 28
5. Elucidation of chemical structure of two isolated compounds = 31
6. Cathepsin B inhibitory activities of two isolated phthalates = 43
7. Effects of two isolated phthalates on cell viability = 49
8. Cathepsin B inhibitory activities of two isolated phthalates on metastatic potential cell = 49
Conclusion = 52
References = 53
Acknowledgment = 60
Degree
Master
Appears in Collections:
대학원 > 공업화학과
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