해양 미생물 Kocuria gwangalliensis서 유래된 lycopene 생합성 유전자의 클로닝 및 특성 연구
- Alternative Title
- Cloning and characterization of genes involved in the lycopene biosynthesis from the marine bacterium, Kocuria gwangalliensis
- Abstract
- Carotenoids are the most widely distributed class of pigments in nature. They typically consist of a C40 hydrocarbon backbone often modified by different oxygen-containing functional group. Previously, we reported the isolation of a new marine bacterium, Kocuria gwangalliensis, which produces pink-orange pigment. A genes encoding a novel geranylgeranyl pyrophosphate (GGPP) synthase (crtE), phytoene synthase (crtB) and phytoene desaturase (crtI) from Kocuria gwangalliensis has been sequenced and expressed in Escherichia coli. The deduced amino acid sequences showed 59.6%, 70.9% and 74.1% identity with a putative GGPP synthase (crtE), phytoene synthase (crtB) and phytoene desaturase (crtI) from K. rhizophila. An expression plasmid containing the crtE, crtB and crtI genes were constructed, and Escherichia coli cells containing these plasmids produced the recombinant proteins of approximately 41 kDa, 34 kDa and 57 kDa, corresponding to the molecular weight of GGPP synthase, phytoene synthase and phytoene desaturase, respectively Biosynthesis of lycopene was obtained when the plasmid pCcrtE was co-transformed into E. coli containing the pRScrtBI carrying crtB, and crtI genes required for lycopene biosynthesis. pCcrtB was co-transformed into E. coli containing the pRScrtEI carrying crtE, and crtI genes, pCcrtI was co-transformed into E.coli containing the pRScrtEB carrying crtE, and crtB. The biochemical studies on the expressed proteins were performed by HPLC. The results obtained from this study will provide a wider base of knowledge on the primary structure of the K. gwangalliensis CrtE, CrtB and CrtI at the molecular level.
- Author(s)
- 김현수
- Issued Date
- 2012
- Awarded Date
- 2012. 2
- Type
- Dissertation
- Keyword
- carotenoid
- Publisher
- 부경대학교 대학원
- URI
- https://repository.pknu.ac.kr:8443/handle/2021.oak/9205
http://pknu.dcollection.net/jsp/common/DcLoOrgPer.jsp?sItemId=000001965675
- Alternative Author(s)
- Hyun Su Kim
- Affiliation
- 부경대학교
- Department
- 대학원 미생물학과
- Advisor
- 김영태
- Table Of Contents
- 1. INTRODUCTION 1
2. MATERIALS AND METHODS 5
2.1 Bacterial strains and growth culture 5
2.2 Genomic DNA extraction and construction of cosmid library 5
2.3 Cloning of lycopene biosynthesis genes from K. gwangalliensis 6
2.4 Comparative sequence analysis of lycopene biosynthesis genes (crtE,crtB,crtI) from K.gwangalliensis 11
2.5 Expression of CrtE, CrtB and CrtI in E. coli 11
2.6 In order to produce lycopene, constrution of dual vector system for coexpression 14
2.7 Extraction and purification of lycopene produced in transformed E. coli 16
3. RESULTS 17
3.1 Cloning of geranylgeranyl pyrophosphate synthase gene (crtE) from K. gwangalliensis 17
3.2 Cloning of phytoene synthase gene (crtB) from K. gwangalliensis 19
3.3 Cloning of phytoene dehydrogenase gene (crtI) from K. gwangalliensis 21
3.4 Analysis of amino acid residues of geranylgeranyl pyrophosphate syntahse (CrtE) from K.gwangalliensis with other species 23
3.5 Analysis of amino acid residues of phytoene syntahse (CrtB) from K. gwangalliensis with other species 27
3.6 Analysis of amino acid residues of phytoene dehydrogenase (CrtI) from K. gwangalliensis with other species 31
3.7 Geranylgeranyl pyrophosphate synthase gene (crtE) expression in E. coli 35
3.8 Phytoene synthase gene (crtB) expression in E. coli 37
3.9 Phytoene dehydrogenase gene (crtI) expression in E. coli 39
3.10 Production of lycopene in E. coli 41
4. DISCUSSION 46
5. 국문초록 48
6. ACKNOWLEDGEMENT 49
7. REFERENCES 50
- Degree
- Master
-
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